Інститут теоретичної фізики ім. М.М. Боголюбова
Національної академії наук України

KMPB-Ukraine Workshop

March 17, 10:00 → March 19. 2026 р., 19:00 (Kyiv time)
Bogolyubov Institute for Theoretical Physics, NASU
mixed online-offline format Room 222

https://indico.desy.de/event/52099/

Workshop
Applied Problems of Theoretical and Computational Biophysics

Time: Mar 18-19, 2026 10:00 AM Helsinki
Bogolyubov Institute for Theoretical Physics, NASU
mixed online-offline format Room 322

Join Zoom Meeting
https://us06web.zoom.us/j/86416276796?pwd=hZLK44cUnK5UACoPUal3yMkhZzBGZT.1
Meeting ID: 864 1627 6796
Passcode: 595694

https://indico.bitp.kiev.ua/event/17/overview

APS_and_Workshop.pdf

Sponsored by the American Physical Society
Information support: Ukrainian Biophysical Society, Kyiv Academic University

Program

March 17

13.30 Opening APS Satellite Symposium
13.30 Sergiy Perepelytsya "Counterions in DNA-nanomaterials" (Bogolyubov Institute for Theoretical Physics of the National Academy of Sciences of Ukraine)
13.42 Francesca Mocci "Molecular dynamics insights into the stabilization of nucleic acid quadruplexes" (University of Cagliari, Cagliari, Italy)
13.54 Anna Shestopalova "Drug repurposing: molecular modelling" (O. Ya. Usikov Institute for Radiophysics and Electronics, NASU, Kharkiv, Ukraine)
14.06 Taras Patsahan "Computer simulation of cell sorting on dynamic microstructured surfaces" (Yukhnovskii Institute for Condensed Matter Physics, Lviv, Ukraine)
14.18 Andrij Baumketner "Modeling aggregation of proteins on computers" (Yukhnovskii Institute for Condensed Matter Physics, Lviv, Ukraine)
14.30 Aleksei Aksimentiev "DNA electromotors" (University of Illinois at Urbana-Champaign, UrbanaChampaign, USA)
14.42 Larissa Brizhik "Soliton mediated long-range electron transport in Donor- Biopolymer-Acceptor systems" (Bogolyubov Institute for Theoretical Physics of the National Academy of Sciences of Ukraine)
14.54 Galyna Dovbeshko "Spectroscopic markers of biological molecules and cells" (Institute of Physics, NASU, Kyiv, Ukraine)
15.06 Victor Karachevtsev "Photoluminescent MoS2 quantum dots surrounded by nucleotides" (B.Verkin Institute for Low Temperature Physics and Engineering, NASU, Kharkiv, Ukraine)
15.18 Khrystyna Gnatenko "Quantum programming for the study of complex systems, and possible applications in biophysics" (Ivan Franko National University of Lviv)
15.30 Eugene Kryachko "On measuring localization and delocalization patterns in molecules" (Bogolyubov Institute for Theoretical Physics of the National Academy of Sciences of Ukraine)
Conference dinner

March 18

10.00 Taras Patsahan "Simulation study of affinity-based cell sorting on switchable microstructured surfaces" (Yukhnovskii Institute for Condensed Matter Physics, Lviv, Ukraine)
10.30 Andrij Baumketner "Modeling aggregation of proteins on computers" (Yukhnovskii Institute for Condensed Matter Physics, Lviv, Ukraine)
11.00 Sergiy Perepelytsya "Counterions in DNA-nanomaterials" (Bogolyubov Institute for Theoretical Physics of the National Academy of Sciences of Ukraine)
11.30 Coffee break
12.00 Marina V. Kosevich "How could a molybdenum metal atom get into biomolecules' structure: mass spectrometry based version" (B. Verkin Institute for Low Temperature Physics and Engineering of the National Academy of Sciences of Ukraine)
12.30 Larissa Brizhik "Nonlinear mechanism of magnetic field impact on charge transport in macromolecules" (Bogolyubov Institute for Theoretical Physics of the National Academy of Sciences of Ukraine)
13.00 Khrystyna Gnatenko "Quantum programming for the study of complex systems, and possible applications in biophysics" (Ivan Franko National University of Lviv)
13.30 Lunch
14.30 Vlada A. Pashynska "Bionanomaterials for drug delivery: computational and experimental study of MoS2-based nanocomposites with anticancer drugs" (B. Verkin Institute for Low Temperature Physics and Engineering of the NAS of Ukraine)
15.00 Yaroslav Ilnytskyi "Adsorption of the low density lipoptoteins on photo-sensitive polymer brushes: computer simulations" (Yukhnovskii Institute for Condensed Matter Physics, Lviv, Ukraine)
15.30 Viktoria Blavatska "The effect of branching in modeling adsorption of impurities by polymeric adsorbents" (Yukhnovskii Institute for Condensed Matter Physics, Lviv, Ukraine)
16-00 Coffee break
16-30 Aleksei Aksimentiev "DNA Electromotors" (University of Illinois at Urbana-Champaign, USA)
17-00 Dmitriy M. Glibitskiy "Towards machine learning-based segmentation of zigzag patterns in BSA film micrographs" (O. Ya. Usikov Institute for Radiophysics and Electronics of the National Academy of Sciences of Ukraine)
17-30 Oleksandr Shchehlov "Multifunctional nanodispersed X-ray phosphors in a drug delivery system in X-ray photodynamic therapy" (Department of Nanomaterials, Chuiko Institute of Surface Chemistry of NAS of Ukraine)
18.00 Closing the Session

March 19

10.00 Galyna Dovbeshko "Physicochemical properties and neurotoxicity of hazardous carbon smoke nanoparticles with heavy metals" (Institute of Physics of the National Academy of Sciences of Ukraine)
10.30 Olena Gnatyuk "Mechanical properties of circulating tumor cells as markers of metastatic activity" (Institute of Physics of the National Academy of Sciences of Ukraine)
11.00 Olena Pavlenko "Quantum mechanical calculations in prediction of properties of π-conjugateded molecules" (Taras Shevchenko National Uviversity of Kyiv)
11.30 Coffee break
12.00 Francesca Mocci "Molecular dynamics insights into the stabilization of nucleic acid quadruplexes" (University of Cagliari, Cagliari, Italy)
12.30 Yevhen Osokin "Quantum-chemical modeling of mono- and biligand complexes of silver ions with some DNA nucleotide bases" (Bogolyubov Institute for Theoretical Physics of the National Academy of Sciences of Ukraine)
13.00 Anna Shestopalova "Drug repurposing: molecular modelling" (O. Ya. Usikov Institute for Radiophysics and Electronics, NASU, Kharkiv, Ukraine)
13.30 Lunch
14.30 Vasyl Hurmach "Targeting TMPRSS2 with carbon nanostructures: an in silico study" (Institute of Molecular Biology and Genetics, National Academy of Sciences of Ukraine)
15.00 Taras Voitsitskyi "Protein-ligand docking with machine learning" (Institute of Physics of the National Academy of Sciences of Ukraine)
15.20 Mykyta Bobylyow "Change in orientation of the Ca2+ sensor protein hippocalcin in its membrane-bound state as a mechanism for the development of primary dystonia" (Department of Molecular Biophysics, Bogomoletz Institute of Physiology; Instytut Chemii Bioorganicznej Polskiej Akademii Nauk, Poznan)
15.35 Mykyta Bobylyow "Collective behavior of the lipid bilayer and the role of PIP₂ in binding the neuronal Ca²⁺ sensor protein hypocalcin" (Department of Molecular Biophysics, Bogomoletz Institute of Physiology; Instytut Chemii Bioorganicznej Polskiej Akademii Nauk, Poznan)
15-50 Coffee break
16-10 Polina Kanevska "Role of internal conformation in the coupled deformation of DNA" (Bogolyubov Institute for Theoretical Physics of the National Academy of Sciences of Ukraine)
16-40 Oleksandr Shovkoplias "Conformational mobility of Trp128 in the EMAP II protein: molecular dynamics study" (Taras Shevchenko National University of Kyiv)
17-00 Andrii Lesiuk "Protein Interactions with bioactive molecules and oxide nanoparticles: spectroscopic and computational studies" (Taras Shevchenko National University of Kyiv)
17.30 Closing
deadline 2026-04-01
Комітет з Національної премії України імені Бориса Патона (далі -Комітет)
оголосив конкурси на здобуття Національної премії України імені Бориса Патона
та премій Президента України для молодих вчених 2026 року.

Секретаріат Комітету проводить прийом робіт на здобуття:

  • Національної премії України імені Бориса Патона - до 01 квітня 2026 року.
  • Премій Президента України для молодих вчених - до 01 березня 2026 року.

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Для довідки: (044) 200-90-04
https://patonprize.gov.ua/news/ogolosheno-konkursi-na-zdobuttya-nacionalno-premi-ukrani-imeni-borisa-patona-ta-premiy-prezidenta-ukrani-dlya-molodih-vchenih-2026-roku